Enhancing the expression of ARK1 genes in poplar leads to multiple branches and transcriptomic changes.
Identifieur interne : 000426 ( Main/Exploration ); précédent : 000425; suivant : 000427Enhancing the expression of ARK1 genes in poplar leads to multiple branches and transcriptomic changes.
Auteurs : Xiaozhen Liu [République populaire de Chine] ; Zhiming Zhang [République populaire de Chine] ; Wen Bian [République populaire de Chine] ; Anan Duan [République populaire de Chine] ; Hanyao Zhang [République populaire de Chine]Source :
- Royal Society open science [ 2054-5703 ] ; 2020.
Abstract
The ARBORKNOX1 (ARK1) gene is an important gene for regulating plant growth and development; however, transcriptomic responses of enhancing expression of ARK1 gene in poplar are poorly investigated. To provide insight into the gene function of the ARK1 gene in poplar, the ARK1 transgenic poplar '717' and '84 K' lines were obtained, the morphology of transgenic plants was observed, and transcriptome profiles were compared. The results showed that there were multiple branches in ARK1 transgenic seedlings compared with non-transgenic seedlings. The results of transcriptome analysis showed that there were significant differences in transcriptome profiles between the transgenic lines of '717' and '84 K', and between non-transgenic lines (CK) and transgenic plants. The real-time quantitative polymerase chain reaction (RT-qPCR) analysis confirmed the expression levels of the genes involved in the pathway of zeatin biosynthesis and brassinosteroid biosynthesis. The increase in expression levels of AHP and CYCD3 was related to multiple branches. Enhancing the expression of the ARK1 gene in poplar seedlings leads to multiple branches and transcriptomic changes.
DOI: 10.1098/rsos.201201
PubMed: 33047064
PubMed Central: PMC7540752
Affiliations:
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China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory for Forest Resources Conservation and Utilization in the Southwest Mountains of China, Southwest Forestry University, Ministry of Education, Kunming, Yunnan 650224</wicri:regionArea><wicri:noRegion>Yunnan 650224</wicri:noRegion></affiliation></author><author><name sortKey="Zhang, Zhiming" sort="Zhang, Zhiming" uniqKey="Zhang Z" first="Zhiming" last="Zhang">Zhiming Zhang</name><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Biodiversity Conservation in Southwest China, State Forest Administration, Southwest Forestry University, Kunming, Yunnan 650224, People's Republic of China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Biodiversity Conservation in Southwest China, State Forest Administration, Southwest Forestry University, Kunming, Yunnan 650224</wicri:regionArea><wicri:noRegion>Yunnan 650224</wicri:noRegion></affiliation></author><author><name sortKey="Bian, Wen" sort="Bian, Wen" uniqKey="Bian W" first="Wen" last="Bian">Wen Bian</name><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Biodiversity Conservation in Southwest China, State Forest Administration, Southwest Forestry University, Kunming, Yunnan 650224, People's Republic of China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Biodiversity Conservation in Southwest China, State Forest Administration, Southwest Forestry University, Kunming, Yunnan 650224</wicri:regionArea><wicri:noRegion>Yunnan 650224</wicri:noRegion></affiliation></author><author><name sortKey="Duan, Anan" sort="Duan, Anan" uniqKey="Duan A" first="Anan" last="Duan">Anan Duan</name><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory for Forest Resources Conservation and Utilization in the Southwest Mountains of China, Southwest Forestry University, Ministry of Education, Kunming, Yunnan 650224, People's Republic of China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory for Forest Resources Conservation and Utilization in the Southwest Mountains of China, Southwest Forestry University, Ministry of Education, Kunming, Yunnan 650224</wicri:regionArea><wicri:noRegion>Yunnan 650224</wicri:noRegion></affiliation></author><author><name sortKey="Zhang, Hanyao" sort="Zhang, Hanyao" uniqKey="Zhang H" first="Hanyao" last="Zhang">Hanyao Zhang</name><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory for Forest Resources Conservation and Utilization in the Southwest Mountains of China, Southwest Forestry University, Ministry of Education, Kunming, Yunnan 650224, People's Republic of China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory for Forest Resources Conservation and Utilization in the Southwest Mountains of China, Southwest Forestry University, Ministry of Education, Kunming, Yunnan 650224</wicri:regionArea><wicri:noRegion>Yunnan 650224</wicri:noRegion></affiliation></author></analytic><series><title level="j">Royal Society open science</title><idno type="ISSN">2054-5703</idno><imprint><date when="2020" type="published">2020</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">The <i>ARBORKNOX1</i> (<i>ARK1</i>) gene is an important gene for regulating plant growth and development; however, transcriptomic responses of enhancing expression of <i>ARK1</i> gene in poplar are poorly investigated. To provide insight into the gene function of the <i>ARK1</i> gene in poplar, the <i>ARK1</i> transgenic poplar '717' and '84 K' lines were obtained, the morphology of transgenic plants was observed, and transcriptome profiles were compared. The results showed that there were multiple branches in <i>ARK1</i> transgenic seedlings compared with non-transgenic seedlings. The results of transcriptome analysis showed that there were significant differences in transcriptome profiles between the transgenic lines of '717' and '84 K', and between non-transgenic lines (CK) and transgenic plants. The real-time quantitative polymerase chain reaction (RT-qPCR) analysis confirmed the expression levels of the genes involved in the pathway of zeatin biosynthesis and brassinosteroid biosynthesis. The increase in expression levels of <i>AHP</i> and <i>CYCD3</i> was related to multiple branches. Enhancing the expression of the <i>ARK1</i> gene in poplar seedlings leads to multiple branches and transcriptomic changes.</div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">33047064</PMID><DateRevised><Year>2020</Year><Month>10</Month><Day>16</Day></DateRevised><Article PubModel="Electronic-eCollection"><Journal><ISSN IssnType="Print">2054-5703</ISSN><JournalIssue CitedMedium="Print"><Volume>7</Volume><Issue>9</Issue><PubDate><Year>2020</Year><Month>Sep</Month></PubDate></JournalIssue><Title>Royal Society open science</Title><ISOAbbreviation>R Soc Open Sci</ISOAbbreviation></Journal><ArticleTitle>Enhancing the expression of <i>ARK1</i> genes in poplar leads to multiple branches and transcriptomic changes.</ArticleTitle><Pagination><MedlinePgn>201201</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1098/rsos.201201</ELocationID><Abstract><AbstractText>The <i>ARBORKNOX1</i> (<i>ARK1</i>) gene is an important gene for regulating plant growth and development; however, transcriptomic responses of enhancing expression of <i>ARK1</i> gene in poplar are poorly investigated. To provide insight into the gene function of the <i>ARK1</i> gene in poplar, the <i>ARK1</i> transgenic poplar '717' and '84 K' lines were obtained, the morphology of transgenic plants was observed, and transcriptome profiles were compared. The results showed that there were multiple branches in <i>ARK1</i> transgenic seedlings compared with non-transgenic seedlings. The results of transcriptome analysis showed that there were significant differences in transcriptome profiles between the transgenic lines of '717' and '84 K', and between non-transgenic lines (CK) and transgenic plants. The real-time quantitative polymerase chain reaction (RT-qPCR) analysis confirmed the expression levels of the genes involved in the pathway of zeatin biosynthesis and brassinosteroid biosynthesis. The increase in expression levels of <i>AHP</i> and <i>CYCD3</i> was related to multiple branches. Enhancing the expression of the <i>ARK1</i> gene in poplar seedlings leads to multiple branches and transcriptomic changes.</AbstractText><CopyrightInformation>© 2020 The Authors.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Liu</LastName><ForeName>Xiaozhen</ForeName><Initials>X</Initials><AffiliationInfo><Affiliation>Key Laboratory for Forest Resources Conservation and Utilization in the Southwest Mountains of China, Southwest Forestry University, Ministry of Education, Kunming, Yunnan 650224, People's Republic of China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zhang</LastName><ForeName>Zhiming</ForeName><Initials>Z</Initials><AffiliationInfo><Affiliation>Key Laboratory of Biodiversity Conservation in Southwest China, State Forest Administration, Southwest Forestry University, Kunming, Yunnan 650224, People's Republic of China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Bian</LastName><ForeName>Wen</ForeName><Initials>W</Initials><AffiliationInfo><Affiliation>Key Laboratory of Biodiversity Conservation in Southwest China, State Forest Administration, Southwest Forestry University, Kunming, Yunnan 650224, People's Republic of China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Duan</LastName><ForeName>Anan</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>Key Laboratory for Forest Resources Conservation and Utilization in the Southwest Mountains of China, Southwest Forestry University, Ministry of Education, Kunming, Yunnan 650224, People's Republic of China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zhang</LastName><ForeName>Hanyao</ForeName><Initials>H</Initials><Identifier Source="ORCID">0000-0001-7440-4348</Identifier><AffiliationInfo><Affiliation>Key Laboratory for Forest Resources Conservation and Utilization in the Southwest Mountains of China, Southwest Forestry University, Ministry of Education, Kunming, Yunnan 650224, People's Republic of China.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><DataBankList CompleteYN="Y"><DataBank><DataBankName>figshare</DataBankName><AccessionNumberList><AccessionNumber>10.6084/m9.figshare.c.5104329</AccessionNumber></AccessionNumberList></DataBank></DataBankList><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2020</Year><Month>09</Month><Day>09</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>R Soc Open Sci</MedlineTA><NlmUniqueID>101647528</NlmUniqueID><ISSNLinking>2054-5703</ISSNLinking></MedlineJournalInfo><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">ARK1 gene</Keyword><Keyword MajorTopicYN="N">poplar</Keyword><Keyword MajorTopicYN="N">real-time quantitative polymerase chain reaction (RT-qPCR) analysis</Keyword><Keyword MajorTopicYN="N">transcriptome profile</Keyword><Keyword MajorTopicYN="N">transgenic seedlings</Keyword></KeywordList><CoiStatement>The authors declare that they have no competing interests.</CoiStatement></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2020</Year><Month>07</Month><Day>08</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2020</Year><Month>08</Month><Day>12</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2020</Year><Month>10</Month><Day>13</Day><Hour>5</Hour><Minute>39</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2020</Year><Month>10</Month><Day>14</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2020</Year><Month>10</Month><Day>14</Day><Hour>6</Hour><Minute>1</Minute></PubMedPubDate></History><PublicationStatus>epublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">33047064</ArticleId><ArticleId 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